References#
Ahlers, J., Althviz Moré, D., Amsalem, O., Anderson, A., Bokota, G., Boone, P., Bragantini, J., Buckley, G., Burt, A., Bussonnier, M., Can Solak, A., Caporal, C., Doncila Pop, D., Evans, K., Freeman, J., Gaifas, L., Gohlke, C., Gunalan, K., Har-Gil, H., … Yamauchi, K. (2023). napari: a multi-dimensional image viewer for Python (v0.4.18). Zenodo. https://doi.org/10.5281/zenodo.8115575
Global Modeling and Assimilation Office (GMAO) (2015), MERRA-2 inst3_3d_asm_Np: 3d,3-Hourly,Instantaneous,Pressure-Level,Assimilation,Assimilated Meteorological Fields V5.12.4, Greenbelt, MD, USA, Goddard Earth Sciences Data and Information Services Center (GES DISC), Accessed: 28 April 2024, 10.5067/QBZ6MG944HW0
M. Berger and I. Rigoutsos, “An algorithm for point clustering and grid generation,” in IEEE Transactions on Systems, Man, and Cybernetics, vol. 21, no. 5, pp. 1278-1286, Sept.-Oct. (1991), doi: 10.1109/21.120081.
Havlin, C., Turk, M., Holtzman, B.K., Orf, L., Halbert, K., Naliboff, J.B., Kowalik, K., Munk, M. and Walkow, S., (2020), December. Visualization and Analysis of 3D Data in the Geosciences Using the yt Platform. In AGU Fall Meeting Abstracts (Vol. 2020, pp. IN037-13) with supplemental materials at chrishavlin/AGU2020
Havlin, C., Holtzman, B., Kowalik, K., Munk, M., Walkow, S. and Turk, M., (2021). 3D volume rendering of geophysical data using the yt platform. Earth and Space Science Open Archive ESSOAr.
Havlin, C. (2023), 3d progressive loading of yt dataset in napari, Available at https://www.youtube.com/watch?v=ofoURuz-Cbw (Accessed 3 May 2024).
Moore, J., Basurto-Lozada, D., Besson, S., Bogovic, J., Bragantini, J., Brown, E.M., Burel, J.M., Casas Moreno, X., de Medeiros, G., Diel, E.E. and Gault, D., (2023). OME-Zarr: a cloud-optimized bioimaging file format with international community support. Histochemistry and Cell Biology, 160(3), pp.223-251. https://doi.org/10.1007/s00418-023-02209-1
Signell, R. (2020). Cloud-Performant NetCDF4/HDF5 with Zarr, Fsspec, and Intake. Available at https://medium.com/pangeo/cloud-performant-netcdf4-hdf5-with-zarr-fsspec-and-intake-3d3a3e7cb935 (Accessed 3 May 2024).
Schmandt, B. and E. Humphreys. (2010). “Complex subduction and small-scale convection revealed by body-wave tomography of the western United States mantle.” Earth and Planetary Science Letters, 297, 435-445, https://doi.org/10.1016/j.epsl.2010.06.047. Avaialable at https://doi.org/10.17611/DP/9991760 (Accessed 1 May 2024)
Package References#
xarray: https://docs.xarray.dev
yt_xarray : https://yt-xarray.readthedocs.io
Zarr: https://zarr.dev/
Dask: https://www.dask.org/